Solving the Genome Jigsaw Puzzle: The role of computer science and mathematics in molecular biology.

Brian Tjaden
Department of Computer Science, University of Washington

Abstract: What is computational biology and what does it mean when scientists say "the human genome has been sequenced?" What role do mathematicians and computer scientists have to play in the genome projects that have revolutionized biology over the past decade? What remains to be done and what are the medical implications of this research? I will present an overview of the field of computational biology, scratching the surface in answering the above questions. This talk will emphasize why recent advances in biology provide a rich source of interesting and important problems for mathematicians and computer scientists. I will discuss in depth one particular research problem: analysis of DNA microarrays. A DNA microarray is a new technology which enables scientists to measure how often segments of DNA, called genes, are ultimately translated into protein molecules - the building blocks of a cell. DNA microarrays provide a wealth of data which require new statistical methods and computational algorithms for interpretation. No prior knowledge of computer science, mathematics, or molecular biology will be assumed.